Click here to close now.

Welcome!

XML Authors: Leon Fayer, Esmeralda Swartz, Carmen Gonzalez, Elizabeth White, Mike Kavis

Related Topics: XML

XML: Article

Use a Native XML Database for Your XML Data

Deciding when an XQuery-based native XML database is better than an SQL database

Developers tend to use the most familiar technologies. For data storage, that is the relational database. During design it's easy to see tables of data everywhere; however, not everything is relational in nature. When dealing with XML data or data easily expressed as XML, XQuery-based native XML databases (NXDs) present a viable and cost-effective alternative to relational databases, file system storage, or custom developed storage implementations. So, when is it time to consider an NXD?

Can native XML databases really provide a better answer for your data storage needs? In this article we'll examine some guidelines to help answer that question.

When to Consider a Native XML Database

  1. Do you have thousands of XML files?
  2. Is your XML data larger than 200MB?
  3. Are you trying to build a hierarchy into tables?
  4. Could your data change over time?
  5. Have you spent more that $100 on books explaining SQLXML?
The File System Isn't a Database
The first two questions are practical in nature. If estimates indicate more than 1000 XML files or 200MB of XML data exist, the file system isn't the right tool for the job. File systems are not built to manage large numbers of files in a single directory or huge directory hierarchies. Managing concurrency, out of disk space conditions, and other common problems will plague your application unless you use a database.

Naturally Hierarchical
The third reason to consider an NXD really has to do with the impedance mismatch between relational databases and XML data. Fundamentally, XML data is hierarchical and is a poor match for a relational database's rows and columns. Relational databases have always had a hard time modeling hierarchies. You'll find dozens of workarounds for this, but no real simple and efficient solution. Any XML-to-relational mapping tool will have to pick one of these techniques and manage this common case as best as possible. Regardless of the solution, performance will suffer. The end result will also be more brittle over time. Changing the structure of the data - which is easy, natural, and useful to do in XML - forces a redesign of the relational database and changes to the mapping layer. A single mapping mistake could completely skew an entire data set. As an XML document structure changes over time, it's possible for attributes to become elements, and vice versa. Over time, incremental changes to the logical structure of the XML data can force physical changes to the database, and wholesale dump and reload may be required of the relational system to keep pace.

Structured Yet Flexible Data
The fourth question suggests that requirements change over time, something true of most real world business systems. Once a relational database schema has been set in stone, only the database administrator (DBA) is qualified to change it without disrupting services. The contract between a relational database and the program that use it becomes the weakest link in the system. As requirements change, the DBA will spend endless hours mitigating the issues that arise. Contrast that with XML databases. XML is both structured and flexible. Even XML documents conforming to a DTD or XML Schema maintain a high degree of flexibility when compared to relational schemas. Most NXDs will optionally validate document structure. Even when document validation is not enforced, XML documents maintain a high degree of implicit structure. Therefore in either case, XML documents are flexible and structured and as a result the contract between the database and the programs using it is not brittle. It can withstand change without requiring a DBA.

Data Mapping Is Wasted Time, Money, and Effort
The last question is really a reality check. Take a second to consider the amount of time and money you've spent trying to make a solution workable. The best thing you can do when digging a hole is to stop digging and get out of the hole. With that in mind, let's look at SQLXML. If you need to mix and match SQL data and XML data, it's not a horrible way to go. However, if you view it as a way to squeeze XML into a relational system in which you've already invested, you might want to reconsider. You are going to pay a performance penalty for every document stored in terms of CPU and memory. Your ability to query, index, and optimize will be impacted as well. Executing XQuery against XML data mapped into relational tables will be hindered by the non-native storage format. An optimized native XML database won't have the same penalty.

Let's take a look at how to use an NXD to learn more about its advantages over a relational database.

Examples and Code
Berkeley DB XML is an open source XQuery implementation built atop the Berkeley DB transactional database system. It supports optimized XML storage, XQuery query planning, massive scale and concurrency, and is available for download as source code for multiple platforms and as a Windows installer from Sleepycat Software (www.sleepycat.com). Berkeley DB XML has also been integrated with Stylus Studio if you're more comfortable using an IDE for development. Berkeley DB XML is readily available to anyone, so we'll use it for the following examples.

First let's create an in-memory container for XML documents. Follow along using the "dbxml" command line provided with Berkeley DB XML.


dbxml> createContainer ""
dbxml> putDocument myDoc <names><name>joe</name><name>fred</
name><name>jane</name></names>
dbxml> query collection('')/names/name[.='joe']
dbxml> print
<name>joe</name>
Line 1 creates the container, while line 2 places a simple document into the container. The third line performs a query on the container returning each document that matches the XPath query /names/name[.=joe]. Finally it displays what we returned by the query statement.

That's all quite useful, but let's say that you need to access your XML storage programmatically. Because Berkeley DB XML is a library, and as such is linked into your application just as any other library would be, it does not incur the overhead of client/server communication. You interact with Berkeley DB XML using one of the supported language APIs. The primary one is C++, as the product is written in C++. Java, Python, Perl, PHP, and TCL are all supported API languages. Many other languages are supported by third parties and are readily available on the Internet.

With that in mind, let's next try some simple C++ code that calls for the same thing as the dbxml commands used in the previous example (see Listing 1).

The underlined sections of the code relate back to the first example. The first underlined section creates a container. This container is called 'test.dbxml,' and is on disk, and rather than in memory. The next underlined section places the same simple XML document into the new container. The last underlined section issues the query, and the while loop equates to the print statement. Put it all together and you have essentially the same result as before. In Java the code looks much the same; again the underlined areas are the common key sections of code (see Listing 2).

As you can see, the API is fairly straightforward and similar across languages. You'll note that the C++ and Java examples create a database on disk rather than in memory simply by giving the container a name.

Let's move back to the dbxml shell and try a more complicated example. This time let's add a few documents, so we can explore the performance of the system.

First let's populate an imaginary parts database.


dbxml> createContainer parts
Creating document storage container
That created an empty container and opened it as the default container in the shell. We can now use the putDocument command to run our XQuery and insert the sample data.

More Stories By Gregory Burd

Gregory Burd is the Product Manager for Sleepycat Software, now a part of Oracle. Prior to Sleepycat, he was on the business team at KnowNow, a Kleiner Perkins startup in the San Francisco Bay Area. He has many years of software development and product leadership within companies such as JavaSoft, a division of Sun Microsystems, Marble Associates, a consulting company, and NeXT Computer, now part of Apple Computer.

More Stories By Kimbro Staken

Kimbro Staken is an independent consultant, author, and open source developer specializing in technologies for XML data management. He is one of the primary developers of the dbXML Core Open Source native XML database and a cofounder of the XML:DB Initiative.

Comments (0)

Share your thoughts on this story.

Add your comment
You must be signed in to add a comment. Sign-in | Register

In accordance with our Comment Policy, we encourage comments that are on topic, relevant and to-the-point. We will remove comments that include profanity, personal attacks, racial slurs, threats of violence, or other inappropriate material that violates our Terms and Conditions, and will block users who make repeated violations. We ask all readers to expect diversity of opinion and to treat one another with dignity and respect.


@ThingsExpo Stories
SYS-CON Events announced today that Solgenia will exhibit at SYS-CON's 16th International Cloud Expo®, which will take place on June 9-11, 2015, at the Javits Center in New York City, NY, and the 17th International Cloud Expo®, which will take place on November 3–5, 2015, at the Santa Clara Convention Center in Santa Clara, CA. Solgenia is the global market leader in Cloud Collaboration and Cloud Infrastructure software solutions. Designed to “Bridge the Gap” between Personal and Professional Social, Mobile and Cloud user experiences, our solutions help large and medium-sized organizations dr...
SYS-CON Events announced today that Liaison Technologies, a leading provider of data management and integration cloud services and solutions, has been named "Silver Sponsor" of SYS-CON's 16th International Cloud Expo®, which will take place on June 9-11, 2015, at the Javits Center in New York, NY. Liaison Technologies is a recognized market leader in providing cloud-enabled data integration and data management solutions to break down complex information barriers, enabling enterprises to make smarter decisions, faster.
The WebRTC Summit 2014 New York, to be held June 9-11, 2015, at the Javits Center in New York, NY, announces that its Call for Papers is open. Topics include all aspects of improving IT delivery by eliminating waste through automated business models leveraging cloud technologies. WebRTC Summit is co-located with 16th International Cloud Expo, @ThingsExpo, Big Data Expo, and DevOps Summit.
@ThingsExpo has been named the Top 5 Most Influential M2M Brand by Onalytica in the ‘Machine to Machine: Top 100 Influencers and Brands.' Onalytica analyzed the online debate on M2M by looking at over 85,000 tweets to provide the most influential individuals and brands that drive the discussion. According to Onalytica the "analysis showed a very engaged community with a lot of interactive tweets. The M2M discussion seems to be more fragmented and driven by some of the major brands present in the M2M space. This really allows some room for influential individuals to create more high value inter...
The world's leading Cloud event, Cloud Expo has launched Microservices Journal on the SYS-CON.com portal, featuring over 19,000 original articles, news stories, features, and blog entries. DevOps Journal is focused on this critical enterprise IT topic in the world of cloud computing. Microservices Journal offers top articles, news stories, and blog posts from the world's well-known experts and guarantees better exposure for its authors than any other publication. Follow new article posts on Twitter at @MicroservicesE
After making a doctor’s appointment via your mobile device, you receive a calendar invite. The day of your appointment, you get a reminder with the doctor’s location and contact information. As you enter the doctor’s exam room, the medical team is equipped with the latest tablet containing your medical history – he or she makes real time updates to your medical file. At the end of your visit, you receive an electronic prescription to your preferred pharmacy and can schedule your next appointment.
The list of ‘new paradigm’ technologies that now surrounds us appears to be at an all time high. From cloud computing and Big Data analytics to Bring Your Own Device (BYOD) and the Internet of Things (IoT), today we have to deal with what the industry likes to call ‘paradigm shifts’ at every level of IT. This is disruption; of course, we understand that – change is almost always disruptive.
SYS-CON Events announced today the IoT Bootcamp – Jumpstart Your IoT Strategy, being held June 9–10, 2015, in conjunction with 16th Cloud Expo and Internet of @ThingsExpo at the Javits Center in New York City. This is your chance to jumpstart your IoT strategy. Combined with real-world scenarios and use cases, the IoT Bootcamp is not just based on presentations but includes hands-on demos and walkthroughs. We will introduce you to a variety of Do-It-Yourself IoT platforms including Arduino, Raspberry Pi, BeagleBone, Spark and Intel Edison. You will also get an overview of cloud technologies s...
SYS-CON Events announced today that SafeLogic has been named “Bag Sponsor” of SYS-CON's 16th International Cloud Expo® New York, which will take place June 9-11, 2015, at the Javits Center in New York City, NY. SafeLogic provides security products for applications in mobile and server/appliance environments. SafeLogic’s flagship product CryptoComply is a FIPS 140-2 validated cryptographic engine designed to secure data on servers, workstations, appliances, mobile devices, and in the Cloud.
Wearable technology was dominant at this year’s International Consumer Electronics Show (CES) , and MWC was no exception to this trend. New versions of favorites, such as the Samsung Gear (three new products were released: the Gear 2, the Gear 2 Neo and the Gear Fit), shared the limelight with new wearables like Pebble Time Steel (the new premium version of the company’s previously released smartwatch) and the LG Watch Urbane. The most dramatic difference at MWC was an emphasis on presenting wearables as fashion accessories and moving away from the original clunky technology associated with t...
SOA Software has changed its name to Akana. With roots in Web Services and SOA Governance, Akana has established itself as a leader in API Management and is expanding into cloud integration as an alternative to the traditional heavyweight enterprise service bus (ESB). The company recently announced that it achieved more than 90% year-over-year growth. As Akana, the company now addresses the evolution and diversification of SOA, unifying security, management, and DevOps across SOA, APIs, microservices, and more.
GENBAND has announced that SageNet is leveraging the Nuvia platform to deliver Unified Communications as a Service (UCaaS) to its large base of retail and enterprise customers. Nuvia’s cloud-based solution provides SageNet’s customers with a full suite of business communications and collaboration tools. Two large national SageNet retail customers have recently signed up to deploy the Nuvia platform and the company will continue to sell the service to new and existing customers. Nuvia’s capabilities include HD voice, video, multimedia messaging, mobility, conferencing, Web collaboration, deskt...
SYS-CON Media announced today that @WebRTCSummit Blog, the largest WebRTC resource in the world, has been launched. @WebRTCSummit Blog offers top articles, news stories, and blog posts from the world's well-known experts and guarantees better exposure for its authors than any other publication. @WebRTCSummit Blog can be bookmarked ▸ Here @WebRTCSummit conference site can be bookmarked ▸ Here
SYS-CON Events announced today that Cisco, the worldwide leader in IT that transforms how people connect, communicate and collaborate, has been named “Gold Sponsor” of SYS-CON's 16th International Cloud Expo®, which will take place on June 9-11, 2015, at the Javits Center in New York City, NY. Cisco makes amazing things happen by connecting the unconnected. Cisco has shaped the future of the Internet by becoming the worldwide leader in transforming how people connect, communicate and collaborate. Cisco and our partners are building the platform for the Internet of Everything by connecting the...
Temasys has announced senior management additions to its team. Joining are David Holloway as Vice President of Commercial and Nadine Yap as Vice President of Product. Over the past 12 months Temasys has doubled in size as it adds new customers and expands the development of its Skylink platform. Skylink leads the charge to move WebRTC, traditionally seen as a desktop, browser based technology, to become a ubiquitous web communications technology on web and mobile, as well as Internet of Things compatible devices.
SYS-CON Events announced today that robomq.io will exhibit at SYS-CON's @ThingsExpo, which will take place on June 9-11, 2015, at the Javits Center in New York City, NY. robomq.io is an interoperable and composable platform that connects any device to any application. It helps systems integrators and the solution providers build new and innovative products and service for industries requiring monitoring or intelligence from devices and sensors.
Docker is an excellent platform for organizations interested in running microservices. It offers portability and consistency between development and production environments, quick provisioning times, and a simple way to isolate services. In his session at DevOps Summit at 16th Cloud Expo, Shannon Williams, co-founder of Rancher Labs, will walk through these and other benefits of using Docker to run microservices, and provide an overview of RancherOS, a minimalist distribution of Linux designed expressly to run Docker. He will also discuss Rancher, an orchestration and service discovery platf...
SYS-CON Events announced today that Akana, formerly SOA Software, has been named “Bronze Sponsor” of SYS-CON's 16th International Cloud Expo® New York, which will take place June 9-11, 2015, at the Javits Center in New York City, NY. Akana’s comprehensive suite of API Management, API Security, Integrated SOA Governance, and Cloud Integration solutions helps businesses accelerate digital transformation by securely extending their reach across multiple channels – mobile, cloud and Internet of Things. Akana enables enterprises to share data as APIs, connect and integrate applications, drive part...
SYS-CON Events announced today that Vitria Technology, Inc. will exhibit at SYS-CON’s @ThingsExpo, which will take place on June 9-11, 2015, at the Javits Center in New York City, NY. Vitria will showcase the company’s new IoT Analytics Platform through live demonstrations at booth #330. Vitria’s IoT Analytics Platform, fully integrated and powered by an operational intelligence engine, enables customers to rapidly build and operationalize advanced analytics to deliver timely business outcomes for use cases across the industrial, enterprise, and consumer segments.
Cloud is not a commodity. And no matter what you call it, computing doesn’t come out of the sky. It comes from physical hardware inside brick and mortar facilities connected by hundreds of miles of networking cable. And no two clouds are built the same way. SoftLayer gives you the highest performing cloud infrastructure available. One platform that takes data centers around the world that are full of the widest range of cloud computing options, and then integrates and automates everything. Join SoftLayer on June 9 at 16th Cloud Expo to learn about IBM Cloud's SoftLayer platform, explore se...